#!/bin/bash -x

STD=3
for N in $(seq 500 500 5000)
do
    ./hmm --gen --L=50 --std=$STD --N=$N  --seqfile=syn-L50-s$STD-N$N.seq
done

for INDEX in {1..10}
do
    for N in $(seq 500 500 5000)
    do
	./hmm --position --seqfile=syn-L50-s$STD-N$N.seq --iter=50 --output=syn-L50-s$STD-N$N.seq.output.$INDEX --outparam=syn-L50-s$STD-N$N.seq.param.$INDEX
    done 
done